Molecular dynamics simulations and in vitro studies of hybrid decellularized leaf-peptide-polypyrrole composites for potential tissue engineering applications.
Saige M MitchellHarrison T PajovichSarah M BroasMindy M HugoIpsita A BanerjeePublished in: Journal of biomolecular structure & dynamics (2022)
Tissue engineering (TE) aims to repair and regenerate damaged tissue by an assimilation of optimal combination of cells specific to the tissue with an appropriate biomaterial. In this work, a new biomaterial for potential cardiac TE applications was developed by utilizing a combination of in silico studies and in vitro experiments. Molecular dynamics (MD) simulations for the formation of the novel composite prepared from the decellularized leaf components cellulose and pectin along with the VEGF derived peptide (NYLTHRQ) and polypyrrole (PPy) was carried out to assess self-assembly, mechanical properties, and interactions with integrin and NPR-C receptors which are commonly found in cells of cardiac tissue. Results of molecular dynamics simulations indicated the successful formation of stable assemblies. MD simulations also revealed that the scaffold successfully interacted with integrin and NPR-C receptors. As a proof of concept, beet leaves were decellularized (DC) and cross-linked with NYLTHRQ and PPy using layer-by-layer assembly. Decellularization (DC) was confirmed by DNA and protein quantification. Incorporation of the NYLTHRQ peptide and polypyrrole was confirmed by FTIR spectroscopy and SEM imaging. The DC-NYLTHRQ-PPy scaffold was seeded with co-cultured cardiomyocytes and vascular smooth muscle cells. The scaffold promoted cell proliferation and adhesion. Actin and Troponin T immunofluorescence staining showed the presence of these critical cardiomyocyte markers. Thus, for the first time we have developed a decellularized leaf-peptide-PPy composite scaffold by a combination of in silico studies and laboratory analyses that may have potential applications in cardiac TE.Communicated by Ramaswamy H. Sarma.
Keyphrases
- tissue engineering
- molecular dynamics
- molecular dynamics simulations
- molecular docking
- induced apoptosis
- vascular smooth muscle cells
- density functional theory
- left ventricular
- cell proliferation
- reduced graphene oxide
- cell cycle arrest
- dendritic cells
- high resolution
- case control
- angiotensin ii
- molecularly imprinted
- endothelial cells
- endoplasmic reticulum stress
- single molecule
- cell adhesion
- human health
- escherichia coli
- cell death
- circulating tumor
- risk assessment
- mass spectrometry
- gold nanoparticles
- oxidative stress
- small molecule
- staphylococcus aureus
- monte carlo
- cell cycle
- aqueous solution
- binding protein
- fluorescence imaging
- cystic fibrosis
- pseudomonas aeruginosa
- circulating tumor cells
- liquid chromatography