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Comparative genomics of the wheat fungal pathogen Pyrenophora tritici-repentis reveals chromosomal variations and genome plasticity.

Paula M MoolhuijzenPao Theen SeeJames K HaneGongjun ShiZhaohui LiuRichard P OliverCaroline S Moffat
Published in: BMC genomics (2018)
Whole genome comparative analysis revealed major chromosomal segmental rearrangements and fusions, highlighting intraspecific genome plasticity in this species. Furthermore, the Ptr race classification was not supported at the whole genome level, as phylogenetic analysis did not cluster the ToxA producing isolates. This expansion of available Ptr genomics resources will directly facilitate research aimed at controlling tan spot disease.
Keyphrases
  • single cell
  • copy number
  • genome wide
  • genetic diversity
  • machine learning
  • deep learning
  • candida albicans
  • gene expression
  • cell wall