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Molecular dynamics of the immune checkpoint programmed cell death protein I, PD-1: conformational changes of the BC-loop upon binding of the ligand PD-L1 and the monoclonal antibody nivolumab.

Bernhard RoitherChris OostenbrinkWolfgang Schreiner
Published in: BMC bioinformatics (2020)
Due to the structural differences of the BC-loop, a signal transduction based on active conformation cannot be ruled out. These findings will have an impact on drug design and will help to refine immunotherapy blocking antibodies.
Keyphrases
  • molecular dynamics
  • monoclonal antibody
  • density functional theory
  • transcription factor
  • binding protein
  • molecular dynamics simulations
  • protein protein
  • dna binding
  • amino acid
  • emergency department