The three-dimensional structure of Drosophila melanogaster (6-4) photolyase at room temperature.
Andrea CelliniWeixiao Yuan WahlgrenLéocadie HenrySuraj PandeySwagatha GhoshLeticia CastillonElin ClaessonHeikki TakalaJoachim KübelAmke NimmrichValentyna KuznetsovaEriko NangoSo IwataShigeki OwadaEmina A StojkovićMarius SchmidtJanne A IhalainenSebastian WestenhoffPublished in: Acta crystallographica. Section D, Structural biology (2021)
(6-4) photolyases are flavoproteins that belong to the photolyase/cryptochrome family. Their function is to repair DNA lesions using visible light. Here, crystal structures of Drosophila melanogaster (6-4) photolyase [Dm(6-4)photolyase] at room and cryogenic temperatures are reported. The room-temperature structure was solved to 2.27 Å resolution and was obtained by serial femtosecond crystallography (SFX) using an X-ray free-electron laser. The crystallization and preparation conditions are also reported. The cryogenic structure was solved to 1.79 Å resolution using conventional X-ray crystallography. The structures agree with each other, indicating that the structural information obtained from crystallography at cryogenic temperature also applies at room temperature. Furthermore, UV-Vis absorption spectroscopy confirms that Dm(6-4)photolyase is photoactive in the crystals, giving a green light to time-resolved SFX studies on the protein, which can reveal the structural mechanism of the photoactivated protein in DNA repair.
Keyphrases
- room temperature
- drosophila melanogaster
- dna repair
- high resolution
- electron microscopy
- single molecule
- ionic liquid
- visible light
- dna damage
- protein protein
- amino acid
- genome wide
- circulating tumor
- dual energy
- healthcare
- magnetic resonance imaging
- type diabetes
- single cell
- adipose tissue
- cell free
- glycemic control
- oxidative stress
- weight loss
- skeletal muscle
- dna methylation
- metabolic syndrome
- insulin resistance
- liquid chromatography
- simultaneous determination