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When "N of 2" is not enough: integrating statistical and functional data in gene discovery.

Christopher A CassaSebastian AkleDaniel M JordanJill A Rosenfeld
Published in: Cold Spring Harbor molecular case studies (2017)
The expanding use of genomic sequencing promises to improve clinical diagnostics and to drive the discovery of new disease genes. Candidate genes are increasingly being identified through recurrent cases (e.g., two or more independent cases ["N of 2"] in which variants are present in the same gene). These second case hits provide statistical evidence of an association, which may then be combined with functional validation or familial segregation studies to bolster the evidence that a gene is truly causal. Here, we discuss how to integrate different forms of functional evidence with human genetics case and segregation data to improve the significance of new disease-gene associations.
Keyphrases
  • copy number
  • genome wide
  • genome wide identification
  • small molecule
  • electronic health record
  • dna methylation
  • high throughput
  • genome wide analysis
  • single cell
  • big data
  • gene expression