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Sierra platinum: a fast and robust peak-caller for replicated ChIP-seq experiments with visual quality-control and -steering.

Lydia MüllerDaniel GerighausenMariam FarmanDirk Zeckzer
Published in: BMC bioinformatics (2016)
We show that Sierra Platinum outperforms currently available methods using a newly generated benchmark data set and using real data from the NIH Roadmap Epigenomics Project. It is robust against noisy replicates.
Keyphrases
  • quality control
  • electronic health record
  • big data
  • genome wide
  • quality improvement
  • high throughput
  • gene expression
  • dna methylation
  • deep learning