Whole-Exome Sequencing Identifies Genetic Variants for Severe Adolescent Idiopathic Scoliosis in a Taiwanese Population.
Min-Rou LinPo-Hsin ChouKuei-Jung HuangJafit TingChia-Ying LiuWan-Hsuan ChouGan-Hong LinJan-Gowth ChangShiro IkegawaShih-Tien WangWei-Chiao ChangPublished in: Journal of personalized medicine (2022)
Adolescent idiopathic scoliosis (AIS) is a three-dimensional spinal curvature deformity that appears in the adolescent period. In this study, we performed whole-exome sequencing on 11 unrelated Taiwanese patients with a Cobb's angle greater than 40 degrees. Our results identified more than 200 potential pathogenic rare variants, however, most of which were carried only by one individual. By in silico pathogenicity annotation studies, we found that TTN , CLCN1 , and SOX8 were the most important genes, as multiple pathogenic variants were within these genes. Furthermore, biological functional annotation indicated critical roles of these AIS candidate genes in the skeletal muscle. Importantly, a pathogenic variant on SOX8 was shared by over 35% of the patients. These results highlighted TTN , CLCN1 , and SOX8 as the most likely susceptibility genes for severe AIS.
Keyphrases
- genome wide
- transcription factor
- skeletal muscle
- stem cells
- copy number
- genome wide identification
- end stage renal disease
- bioinformatics analysis
- early onset
- chronic kidney disease
- ejection fraction
- newly diagnosed
- dna methylation
- young adults
- spinal cord
- mental health
- prognostic factors
- high resolution
- insulin resistance
- genome wide analysis
- type diabetes
- molecular docking
- risk assessment
- drug induced
- cystic fibrosis
- single cell
- staphylococcus aureus
- molecular dynamics simulations
- climate change
- cord blood
- pseudomonas aeruginosa
- case control
- human health