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Platinum-Chimeric Carrier Cells for Ultratrace Cell Analysis in Mass Cytometry.

Yiyang LiBoqian WangZara Ahmad KhanJie HeEdwin CheungWenqiong SuAiting WangHui JiangLai JiangXianting Ding
Published in: Analytical chemistry (2023)
Mass cytometry by time-of-flight (CyTOF), a high-dimensional single-cell analysis platform, detects up to 50 biomarkers at single-cell resolution. However, CyTOF analysis of biological samples with a minimal number of available cells or rare cell subsets remains a major technical challenge due to the extensive loss of cells during cell recovery, staining, and acquisition. Here, we introduce a platinum-chimeric carrier cell strategy for mass cytometry profiling of ultratrace cell samples. Cisplatin can rapidly enter broken plasma membranes of dead cells and form a chimeric interaction with cellular proteins, peptides, and amino acids. Thus, 198 Pt-cisplatin is adopted to tag carrier cells in the pretreatment stage. We investigated 8 cell lines that are commonly accessible in laboratories for their potential as carrier cells to preserve rare target cells for CyTOF analysis. We designed a panel of 35 protein biomarkers to evaluate the comprehensive single-cell subtype classification capability with or without the carrier cell strategy. We further demonstrated the detection and analysis of as few as 1 × 10 4 immune cells using our method. The proposed method thus allows CyTOF analysis on precious clinical samples with less abundant cells.
Keyphrases
  • single cell
  • induced apoptosis
  • cell cycle arrest
  • rna seq
  • cell therapy
  • high throughput
  • endoplasmic reticulum stress
  • stem cells
  • machine learning
  • oxidative stress
  • signaling pathway
  • sensitive detection
  • single molecule