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Cytochrome P450 Family 4F2 and 4F11 Haplotype Mapping and Association with Hepatic Gene Expression and Vitamin K Hydroxylation Activity.

Ayoade N AladeKatrina G ClawMatthew G McDonaldBhagwat PrasadAllan E RettieKenneth E Thummel
Published in: ACS pharmacology & translational science (2024)
This study evaluated the underlying mechanistic links between genetic variability in vitamin K metabolic pathway genes ( CYP4F2 and CYP4F11 ) and phylloquinone hydroxylation activity using genotype- and haplotype-based approaches. Specifically, we characterized genetic variability in the CYP4F2/CYP4F11 locus and compared common single allele genotypes and common haplotypes as predictors of hepatic gene expression, enzyme abundance, and phylloquinone (VK 1 ) ω-hydroxylation kinetics. We measured CYP4F2 and CYP4F11 mRNA levels, CYP4F2 and CYP4F11 protein abundances, and the VK 1 concentration-dependent ω-hydroxylation rate in matched human liver nucleic acid and microsome samples, utilizing a novel in vitro population modeling approach. Results indicate that accounting for the CYP4F2*3 allele alone is sufficient to capture most of the genetic-derived variability in the observed phenotypes. Additionally, our findings highlight the important contribution that CYP4F11 makes toward vitamin K metabolism in the human liver.
Keyphrases
  • gene expression
  • genome wide
  • dna methylation
  • nucleic acid
  • high resolution
  • copy number
  • small molecule
  • amino acid
  • genome wide association study