Unraveling the relevance of the polyadenylation factor EhCFIm25 in Entamoeba histolytica through proteomic analysis.
América Itzallana Salgado-MartínezRodolfo Gamaliel Avila-BonillaEsther Ramírez-MorenoCarlos Alberto Castañón-SánchezCésar López-CamarilloLaurence A MarchatPublished in: FEBS open bio (2021)
We recently reported that silencing of the polyadenylation factor EhCFIm25 in Entamoeba histolytica, the protozoan which causes human amoebiasis, affects trophozoite proliferation, death, and virulence, suggesting that EhCFIm25 may have potential as a new biochemical target. Here, we performed a shotgun proteomic analysis to identify modulated proteins that could explain this phenotype. Data are available via ProteomeXchange with identifier PXD027784. Our results revealed changes in the abundance of 75 proteins. Interestingly, STRING analysis, functional GO-term annotations, KEGG analyses, and literature review showed that modulated proteins are mainly related to glycolysis and carbon metabolism, cytoskeleton dynamics, and parasite virulence, as well as gene expression and protein modifications. Further studies are needed to confirm the hypotheses emerging from this proteomic analysis, to thereby acquire a comprehensive view of the molecular mechanisms involved.
Keyphrases
- gene expression
- escherichia coli
- pseudomonas aeruginosa
- staphylococcus aureus
- antimicrobial resistance
- endothelial cells
- biofilm formation
- dna methylation
- big data
- preterm infants
- case report
- induced pluripotent stem cells
- machine learning
- gestational age
- artificial intelligence
- data analysis
- antibiotic resistance genes
- candida albicans
- life cycle