Early detection of local SARS-CoV-2 outbreaks by wastewater surveillance: a feasibility study.
Maarten NautaOliver McManusKristina Træholt FranckEllinor Lindberg MarvingLasse Dam RasmussenStine Raith RichterSteen EthelbergPublished in: Epidemiology and infection (2023)
Wastewater surveillance and quantitative analysis of SARS-CoV-2 RNA are increasingly used to monitor the spread of COVID-19 in the community. We studied the feasibility of applying the surveillance data for early detection of local outbreaks. A Monte Carlo simulation model was constructed, applying data on reported variation in RNA gene copy concentration in faeces and faecal masses shed. It showed that, even with a constant number of SARS-CoV-2 RNA shedders, the variation in concentrations found in wastewater samples will be large, and that it will be challenging to translate viral concentrations into incidence estimates, especially when the number of shedders is low. Potential signals for early detection of hypothetical outbreaks were analysed for their performance in terms of sensitivity and specificity of the signals. The results suggest that a sudden increase in incidence is not easily identified on the basis of wastewater surveillance data, especially in small sampling areas and in low-incidence situations. However, with a high number of shedders and when combining data from multiple consecutive tests, the performance of wastewater sampling is expected to improve considerably. The developed modelling approach can increase our understanding of the results from wastewater surveillance of SARS-CoV-2.
Keyphrases
- sars cov
- wastewater treatment
- public health
- respiratory syndrome coronavirus
- electronic health record
- anaerobic digestion
- big data
- risk factors
- healthcare
- coronavirus disease
- magnetic resonance imaging
- genome wide
- computed tomography
- magnetic resonance
- artificial intelligence
- data analysis
- deep learning
- gene expression
- climate change
- transcription factor
- human health
- virtual reality
- solid state