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Identification of genetic relationships and subspecies signatures in Xylella fastidiosa.

Nicolas DenancéMartial BriandRomain GaborieauSylvain GaillardMarie-Agnès Jacques
Published in: BMC genomics (2019)
SkIf is a robust and rapid software, freely available, that can be dedicated to the comparison of sequence datasets and is applicable to any field of research. Applied to X. fastidiosa, an emerging pathogen in Europe, it provided an important resource to mine for identifying genetic markers of subspecies to optimize the strategies attempted to limit the pathogen dissemination in novel areas.
Keyphrases
  • genome wide
  • candida albicans
  • dna methylation
  • rna seq
  • loop mediated isothermal amplification