A Multiplexed Urinary Biomarker Panel Has Potential for Alzheimer's Disease Diagnosis Using Targeted Proteomics and Machine Learning.
Jenny HällqvistRui C PintoWendy E HeywoodJonjo CordeyAlexander J M FoulkesCatherine F SlatteryClaire A LeckeyEimear C MurphyHenrik ZetterbergJonathan M SchottKevin A MillsRoss W PatersonPublished in: International journal of molecular sciences (2023)
As disease-modifying therapies are now available for Alzheimer's disease (AD), accessible, accurate and affordable biomarkers to support diagnosis are urgently needed. We sought to develop a mass spectrometry-based urine test as a high-throughput screening tool for diagnosing AD. We collected urine from a discovery cohort (n = 11) of well-characterised individuals with AD (n = 6) and their asymptomatic, CSF biomarker-negative study partners (n = 5) and used untargeted proteomics for biomarker discovery. Protein biomarkers identified were taken forward to develop a high-throughput, multiplexed and targeted proteomic assay which was tested on an independent cohort (n = 21). The panel of proteins identified are known to be involved in AD pathogenesis. In comparing AD and controls, a panel of proteins including MIEN1, TNFB, VCAM1, REG1B and ABCA7 had a classification accuracy of 86%. These proteins have been previously implicated in AD pathogenesis. This suggests that urine-targeted mass spectrometry has potential utility as a diagnostic screening tool in AD.
Keyphrases
- high throughput
- mass spectrometry
- machine learning
- liquid chromatography
- single cell
- cancer therapy
- high resolution
- high performance liquid chromatography
- gas chromatography
- cognitive decline
- drug delivery
- big data
- high resolution mass spectrometry
- mild cognitive impairment
- tandem mass spectrometry
- hiv infected
- human immunodeficiency virus
- protein protein
- gas chromatography mass spectrometry