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Massive gene presence-absence variation shapes an open pan-genome in the Mediterranean mussel.

Marco GerdolRebeca MoreiraFernando CruzJessica Gómez-GarridoAnna VlasovaUmberto RosaniPaola VenierMiguel A Naranjo-OrtizMaria MurgarellaSamuele GrecoPablo BalseiroAndré CorveloLeonor FriasMarta GutToni GabaldónAlberto PallaviciniCarlos CanchayaBeatriz NovoaTyler S AliotoDavid PosadaAntonio Figueras
Published in: Genome biology (2020)
Dispensable genes usually belong to young and recently expanded gene families enriched in survival functions, which might be the key to explain the resilience and invasiveness of this species. This unique pan-genome architecture is characterized by dispensable genes in accessory genomic regions that exceed by orders of magnitude those observed in other metazoans, including humans, and closely mirror the open pan-genomes found in prokaryotes and in a few non-metazoan eukaryotes.
Keyphrases
  • genome wide
  • genome wide identification
  • copy number
  • dna methylation
  • genome wide analysis
  • transcription factor
  • minimally invasive
  • climate change
  • bioinformatics analysis
  • gene expression