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Temperature-driven coordination of circadian transcriptome regulation.

Bingxian XuDae-Sung HwangboSumit SaurabhClark RosensweigRavi AlladaWilliam L KathRosemary I Braun
Published in: bioRxiv : the preprint server for biology (2023)
subjected to low temperatures, little is known regarding how these changes are enacted at a molecular level. By conducting bulk RNA sequencing from fruit flies, we observe that genome-wide circadian oscillation patterns are temperature dependent. Intriguingly, we find that morning and evening peaks of transcriptomic activity shift closer together, consistent with anticipation of a shorter photoperiod in cooler winter weather. We further find that the low-temperature dynamics are highly coordinated with respect to a reference-based gene regulatory network. Our findings provide insights into the mechanisms by which flies adapt to environmental temperature changes.
Keyphrases
  • genome wide
  • single cell
  • rna seq
  • dna methylation
  • gene expression
  • high frequency
  • drosophila melanogaster
  • copy number