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Clonal expansion behind a marine diatom bloom.

Maria Valeria RuggieroDomenico D'AlelioMaria Immacolata FerranteMariano SantoroLaura VitaleGabriele ProcacciniMarina Montresor
Published in: The ISME journal (2017)
Genetic diversity is what selection acts on, thus shaping the adaptive potential of populations. We studied micro-evolutionary patterns of the key planktonic diatom Pseudo-nitzschia multistriata at a long-term sampling site over 2 consecutive years by genotyping isolates with 22 microsatellite markers. We show that both sex and vegetative growth interplay in shaping intraspecific diversity. We document a brief but massive demographic and clonal expansion driven by strains of the same mating type. The analysis of an extended data set (6 years) indicates that the genetic fingerprint of P. multistriata changed over time with a nonlinear pattern, with intermittent periods of weak and strong diversification related to the temporary predominance of clonal expansions over sexual recombination. These dynamics, rarely documented for phytoplankton, contribute to the understanding of bloom formation and of the mechanisms that drive microevolution in diatoms.
Keyphrases
  • genetic diversity
  • genome wide
  • escherichia coli
  • dna damage
  • dna repair
  • big data
  • gene expression
  • high throughput
  • machine learning
  • deep learning
  • health insurance