Glioblastoma-infiltrating CD8+ T cells are predominantly a clonally expanded GZMK+ effector population.
Anthony Z WangBryce L MashimoMaximilian O SchaettlerNgima D SherpaLydia A LeavittAlexandra J LivingstoneSaad M KhanMao LiMarkus I Anzaldua-CamposJoseph D BradleyEric C LeuthardtAlbert H KimJoshua L DowlingMichael R ChicoinePamela Stuart JonesBryan D ChoiDaniel P CahillBob S CarterAllegra A PettiTanner M JohannsGavin P DunnPublished in: Cancer discovery (2024)
Recent clinical trials have highlighted the limited efficacy of T cell-based immunotherapy in patients with glioblastoma (GBM). To better understand the characteristics of tumor-infiltrating lymphocytes (TIL) in GBM, we performed cellular indexing of transcriptomes and epitopes by sequencing (CITE-seq) and single-cell RNA sequencing (scRNA-seq) with paired V(D)J sequencing, respectively, on TIL from two cohorts of patients totaling 15 patients with high grade glioma, including GBM or astrocytoma, IDH mutant, grade 4 (G4A). Analysis of the CD8+ TIL landscape reveals an enrichment of clonally expanded GZMK+ effector T cells in the tumor compared to matched blood, which was validated at the protein level. Furthermore, integration with other cancer types highlights the lack of a canonically exhausted CD8+ T cell population in GBM TIL. These data suggest that GZMK+ effector T cells represent an important T cell subset within the GBM microenvironment and which may harbor potential therapeutic implications.
Keyphrases
- single cell
- rna seq
- high grade
- high throughput
- regulatory t cells
- clinical trial
- dendritic cells
- end stage renal disease
- low grade
- ejection fraction
- newly diagnosed
- type iii
- chronic kidney disease
- stem cells
- peritoneal dialysis
- prognostic factors
- electronic health record
- peripheral blood
- wild type
- machine learning
- dna methylation
- protein protein
- binding protein
- young adults
- african american