Exploring the biological basis of CT imaging features in pancreatic neuroendocrine tumors: a two-center study.
Lei XuYan WuXiaoyong ShenLuping ZhouYongkai LuZe TengJichen DuMingchao DingHongbin HanTianye NiuPublished in: Physics in medicine and biology (2024)
Objective Medical imaging offered a non-invasive window to visualize tumors, with radiomics transforming these images into quantitative data for tumor phenotyping. However, the intricate web linking imaging features, clinical endpoints, and tumor biology was mostly uncharted. This study aimed to unravel the connections between CT imaging features and clinical characteristics, including tumor histopathological grading, clinical stage, and endocrine symptoms, alongside immunohistochemical markers of tumor cell growth, such as the Ki-67 index and nuclear mitosis rate.
Approach We conducted a retrospective analysis of data from 137 patients with pancreatic neuroendocrine tumors who had undergone contrast-enhanced CT scans across two institutions. Our study focused on three clinical factors: pathological grade, clinical stage, and endocrine symptom status, in addition to two immunohistochemical markers: the Ki-67 index and the rate of nuclear mitosis. We computed both predefined (2D and 3D) and learning-based features (via sparse autoencoder, or SAE) from the scans. To unearth the relationships between imaging features, clinical factors, and immunohistochemical markers, we employed the Spearman rank correlation along with the Benjamini-Hochberg method. Furthermore, we developed and validated radiomics signatures to foresee these clinical factors.
Main results The 3D imaging features showed the strongest relationships with clinical factors and immunohistochemical markers. For the association with pathological grade, the mean absolute value of the correlation coefficient (CC) of 2D, SAE, and 3D features was 0.3318±0.1196, 0.2149±0.0361, and 0.4189±0.0882, respectively. While for the association with Ki-67 index and rate of nuclear mitosis, the 3D features also showed higher correlations, with CC as 0.4053±0.0786 and 0.4061±0.0806. In addition, the 3D feature-based signatures showed optimal performance in clinical factor prediction.
Significance We found relationships between imaging features, clinical factors, and immunohistochemical markers. The 3D features showed higher relationships with clinical factors and immunohistochemical markers.
Keyphrases
- contrast enhanced
- high resolution
- computed tomography
- magnetic resonance imaging
- machine learning
- healthcare
- squamous cell carcinoma
- radiation therapy
- high throughput
- physical activity
- deep learning
- gene expression
- electronic health record
- positron emission tomography
- depressive symptoms
- genome wide
- dna methylation
- photodynamic therapy
- sleep quality
- big data
- dual energy
- rectal cancer