Design and Prototyping of Genetically Encoded Arsenic Biosensors Based on Transcriptional Regulator AfArsR.
Salma Saeed KhanYi ShenMuhammad Qaiser FatmiRobert E CampbellHabib BokhariPublished in: Biomolecules (2021)
Genetically encoded biosensors based on engineered fluorescent proteins (FPs) are essential tools for monitoring the dynamics of specific ions and molecules in biological systems. Arsenic ion in the +3 oxidation state (As3+) is highly toxic to cells due to its ability to bind to protein thiol groups, leading to inhibition of protein function, disruption of protein-protein interactions, and eventually to cell death. A genetically encoded biosensor for the detection of As3+ could potentially facilitate the investigation of such toxicity both in vitro and in vivo. Here, we designed and developed two prototype genetically encoded arsenic biosensors (GEARs), based on a bacterial As3+ responsive transcriptional factor AfArsR from Acidithiobacillus ferrooxidans. We constructed FRET-based GEAR biosensors by insertion of AfArsR between FP acceptor/donor FRET pairs. We further designed and engineered single FP-based GEAR biosensors by insertion of AfArsR into GFP. These constructs represent prototypes for a new family of biosensors based on the ArsR transcriptional factor scaffold. Further improvements of the GEAR biosensor family could lead to variants with suitable performance for detection of As3+ in various biological and environmental systems.
Keyphrases
- label free
- cell death
- drinking water
- transcription factor
- quantum dots
- gene expression
- single molecule
- cell cycle arrest
- living cells
- energy transfer
- gold nanoparticles
- protein protein
- oxidative stress
- fluorescent probe
- sensitive detection
- wastewater treatment
- binding protein
- dna methylation
- small molecule
- amino acid
- hydrogen peroxide
- nitric oxide
- signaling pathway
- copy number
- climate change