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Metabolic profiling and biological potential of the marine sponge associated Nocardiopsis sp. UR67 along with docking studies.

Alyaa Hatem IbrahimEman Zekry AttiaHeba A HofnyFaisal AlSenaniAhmed ZayedMostafa E RatebUsama Ramadan AbdelmohsenSamar Yehia DesoukeyMostafa Ahmed FouadMohamed Salah Kamel
Published in: Natural product research (2022)
This work was performed to dig into the phytochemical composition and bioactivities of Nocardiopsis sp. UR67 associated with the marine sponge Callyspongia sp. It was fermented in suspension and immobilised in calcium alginate bead cultures. The ethyl acetate extracts, afforded from the broth in each case named EG-49 and J-48g, respectively, revealed 16 chemical principles mostly belonging to polyketides, macrolides, and peptides. EG-49 and J-48g displayed anti- Candida albicans activity with IC 50 values of 8.1 and 8.3 µg/mL, and a substantial cytotoxic effect against lung adenocarcinoma H1650 at IC 50 12.6 and 13.7 µg/mL, respectively. However, only EG-49 exhibited a noteworthy anti-trypanosomal activity at 7.5 µg/mL. Molecular docking of the characterised compounds against Trypanosoma brucei trypanothione reductase demonstrated the highest binding models of griseochelin-methyl ester ( 9 ) and filipin-II ( 11 ), which drew considerable significance of the metabolites derived from Nocardiopsis sp. UR67 developing potential T. brucei trypanothione reductase inhibitors.
Keyphrases
  • molecular docking
  • candida albicans
  • molecular dynamics simulations
  • single cell
  • biofilm formation
  • ms ms
  • ionic liquid
  • escherichia coli
  • climate change
  • amino acid
  • risk assessment