Genome-Wide Characterization of TAZ Binding Sites in Mammary Epithelial Cells.
Tao LiuJiaojiao ZhouYanmin ChenJia FangSong LiuCosta FrangouHai WangJianmin ZhangPublished in: Cancers (2023)
The transcriptional co-activator with PDZ binding motif (TAZ) is a key effector of the Hippo signaling pathway. We and others previously reported that high expression levels of TAZ are positively associated with decreased survival rates and shorter times to relapse in basal-like breast cancer (BLBC) patients. The oncogenic activity of TAZ involves the regulation of diverse signal transduction pathways that direct processes such as cell proliferation, migration, and resistance to apoptosis, albeit through poorly characterized gene expression programs. Here, using a tet-inducible system in mammary epithelial MCF10A cells, we have characterized the TAZ-regulated transcription program using RNA sequencing in a temporal and spatial manner. We further identified global TAZ binding sites at different TAZ activation time points by chromatin immunoprecipitation (ChIP) sequencing analysis. We found that the vast majority of TAZ was rapidly localized in enhancer regions at the early TAZ activation time point and then gradually spread to promoter regions. TAZ bound to enhancer regions following a switch in potential TEAD and FOSL2 transcription factor motifs. Furthermore, the ATAC sequencing analysis indicated that TAZ activation led to chromatin structural alterations. Together, our results have revealed the landscape of genome-wide TAZ binding sites and may lead to improvements in the current understanding of how TAZ regulates the gene expression program that contributes to the development of breast cancer.
Keyphrases
- transcription factor
- gene expression
- genome wide
- dna methylation
- cell proliferation
- signaling pathway
- single cell
- end stage renal disease
- oxidative stress
- chronic kidney disease
- cell cycle arrest
- public health
- binding protein
- dendritic cells
- epithelial mesenchymal transition
- climate change
- quality improvement
- cell death
- cell cycle
- breast cancer cells
- risk assessment
- regulatory t cells
- peritoneal dialysis
- free survival