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Overlapping group screening for detection of gene-gene interactions: application to gene expression profiles with survival trait.

Jie-Huei WangYi-Hau Chen
Published in: BMC bioinformatics (2018)
The OGS approach is useful for selecting important genes and epistasis interactions in the ultra-high dimensional feature space. The prediction ability of OGS with the Lasso penalty is better than existing methods. The OGS approach is generally applicable to various types of outcome data (quantitative, qualitative, censored event time data) and regression models (e.g. linear, logistic, and Cox's regression models).
Keyphrases
  • genome wide
  • gene expression
  • genome wide identification
  • dna methylation
  • electronic health record
  • copy number
  • big data
  • high resolution
  • genome wide analysis
  • systematic review
  • artificial intelligence