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Depletion of lamins B1 and B2 promotes chromatin mobility and induces differential gene expression by a mesoscale-motion-dependent mechanism.

Emily M PujadasXiaolong WeiNicolas AcostaLucas M CarterJiekun YangLuay M AlmassalhaSurbhi JainAli DaneshkhahSuhas S P RaoFidan Seker-PolatKyle L MacQuarrieJoe IbarraVasundhara AgrawalErez Lieberman AidenMasato T KanemakiVadim BackmanMazhar Adli
Published in: Genome biology (2024)
Our findings suggest that, while B-type lamin degradation does not significantly change genome topology, it has major implications for three-dimensional chromatin conformation at the single-cell level both at the lamina-associated periphery and the non-LAD-associated nuclear interior with concomitant genome-wide transcriptional changes. This raises intriguing questions about the individual and overlapping roles of lamin B1 and lamin B2 in cellular function and disease.
Keyphrases
  • gene expression
  • genome wide
  • dna methylation
  • single cell
  • transcription factor
  • copy number
  • rna seq
  • dna damage
  • high throughput
  • molecular dynamics simulations
  • high resolution
  • crystal structure