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Development of ReaxFF Reactive Force Field for Aqueous Iron-Sulfur Clusters with Applications to Stability and Reactivity in Water.

Evgeny MoermanDavid FurmanDavid J Wales
Published in: Journal of chemical information and modeling (2021)
Iron-sulfur clusters serve unique roles in biochemistry, geochemistry, and renewable energy technologies. However, a full theoretical understanding of their structures and properties is still lacking. To facilitate large-scale reactive molecular dynamics simulations of iron-sulfur clusters in aqueous environments, a ReaxFF reactive force field is developed, based on an extensive set of quantum chemical calculations. This force field compares favorably with the reference calculations on gas-phase species and significantly improves on a previous ReaxFF parametrization. We employ the new potential to study the stability and reactivity of iron-sulfur clusters in explicit water with constant-temperature reactive molecular dynamics. The aqueous species exhibit a dynamic, temperature-dependent behavior, in good agreement with previous much more costly ab initio simulations.
Keyphrases
  • molecular dynamics simulations
  • molecular dynamics
  • density functional theory
  • molecular docking
  • iron deficiency
  • single molecule
  • ionic liquid
  • high resolution
  • risk assessment
  • mass spectrometry
  • human health