Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics.
Kelly StreetDavide RissoRussell B FletcherDiya DasJohn NgaiNir YosefElizabeth PurdomSandrine DudoitPublished in: BMC genomics (2018)
Slingshot is a uniquely robust and flexible tool which combines the highly stable techniques necessary for noisy single-cell data with the ability to identify multiple trajectories. Accurate lineage inference is a critical step in the identification of dynamic temporal gene expression.