Visualization of the internal structure of Didymosphenia geminata frustules using nano X-ray tomography.
Izabela ZgłobickaQiong LiJürgen GluchMagdalena PłocińskaTeresa NogaRomuald DoboszRobert SzoszkiewiczAndrzej WitkowskiEhrenfried ZschechKrzysztof J KurzydłowskiPublished in: Scientific reports (2017)
For the first time, the three-dimensional (3D) internal structure of naturally produced Didymosphenia geminata frustules were nondestructively visualized at sub-100 nm resolution. The well-optimized hierarchical structures of these natural organisms provide insight that is needed to design novel, environmentally friendly functional materials. Diatoms, which are widely distributed in freshwater, seawater and wet soils, are well known for their intricate, siliceous cell walls called 'frustules'. Each type of diatom has a specific morphology with various pores, ribs, minute spines, marginal ridges and elevations. In this paper, the visualization is performed using nondestructive nano X-ray computed tomography (nano-XCT). Arbitrary cross-sections through the frustules, which can be extracted from the nano-XCT 3D data set for each direction, are validated via the destructive focused ion beam (FIB) cross-sectioning of regions of interest (ROIs) and subsequent observation by scanning electron microscopy (SEM). These 3D data are essential for understanding the functionality and potential applications of diatom cells.
Keyphrases
- electron microscopy
- computed tomography
- electronic health record
- induced apoptosis
- high resolution
- big data
- heavy metals
- single cell
- magnetic resonance imaging
- human health
- photodynamic therapy
- cell therapy
- positron emission tomography
- stem cells
- risk assessment
- artificial intelligence
- cell cycle arrest
- oxidative stress
- data analysis
- mesenchymal stem cells
- endoplasmic reticulum stress
- machine learning
- mass spectrometry
- pet ct