A novel missense compound heterozygous variant in TLR1 gene is associated with susceptibility to rheumatoid arthritis - structural perspective and functional annotations.
Usman PashaKiran HanifHaseeb NisarRizwan AbidMuhammad Usman MirzaBilal WajidHaseeb NisarPublished in: Clinical rheumatology (2023)
The results, validated through case-control study subjects, suggested that the variants identified through WES and confirmed through Sanger sequencing and MDS are the novel disease variants and are likely to confer RA-susceptibility, independently and/or in a family-specific context. Key Points • Exploration of population based/ethno-specific big data is imperative to identify novel causal variants of RA. • Two new deleterious missense mutations in mutational hotspot exon 4 of TLR1 gene have been identified in Pakistani RA patients. • MD simulation data provides evidence for domain's rigidification, conferring stability to mutant TLR1-TIR/TIRAP-TIR complex, with concomitant increase in production of pro-inflammatory cytokines, thus adding to the onset/erosive outcome of RA.
Keyphrases
- rheumatoid arthritis
- copy number
- big data
- disease activity
- toll like receptor
- inflammatory response
- ankylosing spondylitis
- immune response
- artificial intelligence
- end stage renal disease
- genome wide
- interstitial lung disease
- machine learning
- ejection fraction
- intellectual disability
- newly diagnosed
- systemic lupus erythematosus
- chronic kidney disease
- nuclear factor
- prognostic factors
- early onset
- dna methylation
- peritoneal dialysis
- patient reported outcomes
- genome wide analysis
- patient reported