mBARq: a versatile and user-friendly framework for the analysis of DNA barcodes from transposon insertion libraries, knockout mutants, and isogenic strain populations.

Anna SintsovaHans-Joachim RuscheweyhChristopher M FieldLilith FeerBidong D NguyenBenjamin DanielWolf-Dietrich HardtJulia A VorholtShinichi Sunagawa

Published in: Bioinformatics (Oxford, England) (2024)

The tool is implemented in Python. The source code is freely available (https://github.com/MicrobiologyETHZ/mbarq) and the web app can be accessed at: https://microbiomics.io/tools/mbarq-app.

Keyphrases

circulating tumor
cell free
single molecule
wild type
genetic diversity
nucleic acid