Clinically actionable cancer somatic variants (CACSV): a tumor interpreted dataset for analytical workflows.

Mohamed El-KaliobyGhassan TashkandiDonya BahussainRaneem Al-Harbi

Published in: BMC medical genomics (2022)

CACSV is a step toward cell-specific genetic variants standardized interpretation as it is readily adaptable by most clinical laboratory pipelines for somatic variants clinical annotations. CACSV is freely accessible at ( https://github.com/tsobahytm/CACSV/tree/main/dataset ).

Keyphrases

copy number
single cell
squamous cell carcinoma
cell therapy
stem cells
gene expression
mesenchymal stem cells
liquid chromatography