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Genomic insight into domestication of rubber tree.

Jinquan ChaoShaohua WuMinjing ShiXia XuQiang GaoHuilong DuBin GaoDong GuoShuguang YangShixin ZhangYan LiXiuli FanChunyan HaiLiquan KouJiao ZhangZhiwei WangYan LiWenbo XueJiang XuXiaomin DengXiao HuangXinsheng GaoXiaofei ZhangYanshi HuXia ZengWeiguo LiLiangsheng ZhangShiqing PengJilin WuBingzhong HaoXuchu WangHong YuJiayang LiChengzhi LiangWei-Min Tian
Published in: Nature communications (2023)
Understanding the genetic basis of rubber tree (Hevea brasiliensis) domestication is crucial for further improving natural rubber production to meet its increasing demand worldwide. Here we provide a high-quality H. brasiliensis genome assembly (1.58 Gb, contig N50 of 11.21 megabases), present a map of genome variations by resequencing 335 accessions and reveal domestication-related molecular signals and a major domestication trait, the higher number of laticifer rings. We further show that HbPSK5, encoding the small-peptide hormone phytosulfokine (PSK), is a key domestication gene and closely correlated with the major domestication trait. The transcriptional activation of HbPSK5 by myelocytomatosis (MYC) members links PSK signaling to jasmonates in regulating the laticifer differentiation in rubber tree. Heterologous overexpression of HbPSK5 in Russian dandelion (Taraxacum kok-saghyz) can increase rubber content by promoting laticifer formation. Our results provide an insight into target genes for improving rubber tree and accelerating the domestication of other rubber-producing plants.
Keyphrases
  • genome wide
  • copy number
  • dna methylation
  • transcription factor
  • gene expression
  • cell proliferation
  • oxidative stress
  • single molecule