Unravelling the mechanism of neurotensin recognition by neurotensin receptor 1.
Kazem AsadollahiSunnia RajputLazarus Andrew de ZhangChing-Seng AngShuai NieNicholas A WilliamsonMichael D W GriffinRoss A D BathgateDaniel J ScottThomas R WeiklGuy N L JamesonPaul R GooleyPublished in: Nature communications (2023)
The conformational ensembles of G protein-coupled receptors (GPCRs) include inactive and active states. Spectroscopy techniques, including NMR, show that agonists, antagonists and other ligands shift the ensemble toward specific states depending on the pharmacological efficacy of the ligand. How receptors recognize ligands and the kinetic mechanism underlying this population shift is poorly understood. Here, we investigate the kinetic mechanism of neurotensin recognition by neurotensin receptor 1 (NTS 1 ) using 19 F-NMR, hydrogen-deuterium exchange mass spectrometry and stopped-flow fluorescence spectroscopy. Our results indicate slow-exchanging conformational heterogeneity on the extracellular surface of ligand-bound NTS 1 . Numerical analysis of the kinetic data of neurotensin binding to NTS 1 shows that ligand recognition follows an induced-fit mechanism, in which conformational changes occur after neurotensin binding. This approach is applicable to other GPCRs to provide insight into the kinetic regulation of ligand recognition by GPCRs.
Keyphrases
- single molecule
- high resolution
- mass spectrometry
- molecular dynamics
- solid state
- molecular dynamics simulations
- magnetic resonance
- single cell
- liquid chromatography
- electronic health record
- high glucose
- oxidative stress
- transcription factor
- dna binding
- convolutional neural network
- high performance liquid chromatography
- quantum dots
- artificial intelligence
- drug induced
- gas chromatography
- capillary electrophoresis
- data analysis