Genome Mining Leads to Diverse Sesquiterpenes with Anti-inflammatory Activity from an Arctic-Derived Fungus.
Yaodong NingQinwufeng GuTe ZhengYao XuSong LiYuping ZhuBo HuHao-Bing YuXiaoyu LiuYun ZhangBinghua JiaoXiaoling LuPublished in: Journal of natural products (2024)
With the advancement of bioinformatics, the integration of genome mining with efficient separation technology enables the discovery of a greater number of novel bioactive compounds. The deletion of the key gene responsible for triterpene cyclase biosynthesis in the polar strain Eutypella sp. D-1 instigated metabolic shunting, resulting in the activation of dormant genes and the subsequent production of detectable, new compounds. Fifteen sesquiterpenes were isolated from the mutant strain, with eight being new compounds. The structural elucidation of these compounds was obtained through a combination of HRESIMS, NMR spectroscopy, and ECD calculations, revealing six distinct skeleton types. Compound 7 possessed a unique skeleton of 5/10 macrocyclic ether structure. Based on the gene functions and newly acquired secondary metabolites, the metabolic shunting pathway in the mutant strain was inferred. Compounds 6 , 8 , 11 , 14 , and 15 exhibited anti-inflammatory effects without cytotoxicity through the release of nitric oxide from lipopolysaccharide-stimulated RAW264.7 cells. Notably, acorane-type sesquiterpene 8 inhibited nitric oxide production and modulated the MAPK and NLRP3/caspase-1 signaling pathways. Compound 8 also alleviated the CuSO 4 -induced systemic neurological inflammation symptoms in a transgenic fluorescent zebrafish model.
Keyphrases
- nitric oxide
- genome wide
- induced apoptosis
- signaling pathway
- oxidative stress
- genome wide identification
- copy number
- dna methylation
- pi k akt
- climate change
- nitric oxide synthase
- endoplasmic reticulum stress
- cell death
- genome wide analysis
- ionic liquid
- high throughput
- transcription factor
- quantum dots
- cell proliferation
- diabetic rats
- mass spectrometry
- gene expression
- epithelial mesenchymal transition
- wild type
- subarachnoid hemorrhage
- nlrp inflammasome
- living cells
- physical activity
- single cell