Rapid Approach for Detection of Antibiotic Resistance in Bacteria Using Vibrational Spectroscopy.
Kamilla KochanCara NethercottJamileh TaghavimoghaddamZack RichardsonElizabeth LaiSimon A CrawfordAnton Y PelegBayden R WoodPhilip HeraudPublished in: Analytical chemistry (2020)
Here, we applied vibrational spectroscopy to investigate the drug response following incubation of S. aureus with oxacillin. The main focus of this work was to identify the chemical changes caused by oxacillin over time and to determine the feasibility of the spectroscopic approach to detect antimicrobial resistance. The oxacillin-induced changes in the chemical composition of susceptible bacteria, preceding (and leading to) the inhibition of growth, included an increase in the relative content of nucleic acids, alteration in the α-helical/β-sheet protein ratio, structural changes in carbohydrates (observed via changes in the band at 1035 cm-1), and significant thickening of the cell wall. These observations enabled a dose-dependent discrimination between susceptible bacteria incubated with and without oxacillin after 120 min. In methicillin resistant strains, no spectral differences were observed between cells, regardless of drug exposure. These results pave the way for a new, rapid spectroscopic approach to detect drug resistance in pathogens, based on their early positive/negative drug response.
Keyphrases
- antimicrobial resistance
- loop mediated isothermal amplification
- cell wall
- molecular docking
- molecular dynamics simulations
- induced apoptosis
- high resolution
- staphylococcus aureus
- density functional theory
- escherichia coli
- single molecule
- adverse drug
- drug induced
- optical coherence tomography
- cell cycle arrest
- magnetic resonance imaging
- oxidative stress
- computed tomography
- energy transfer
- cell proliferation
- sensitive detection
- binding protein
- protein protein
- endoplasmic reticulum stress
- small molecule
- cell death
- gram negative
- molecular dynamics