Saliva Based Diagnostic Prediction of Oral Squamous Cell Carcinoma using FTIR Spectroscopy.
Priya ShreeYogendra AggarwalManish KumarLakhan MajheeNarendra Nath SinghOm PrakashAkhilesh ChandraSimpy Amit MahuliShoa ShamsiArpita RaiPublished in: Indian journal of otolaryngology and head and neck surgery : official publication of the Association of Otolaryngologists of India (2024)
Oral cancer ranks as the sixth most prevalent form of cancer worldwide, presenting a significant public health concern. According to the World Health Organization (WHO), within a 5-year period following diagnosis, the mortality rate among oral cancer patients of all stages stands at 45%. In this study, a total of 60 patients divided into 2 groups were recruited. Group A included 30 histo-pathologically confirmed OSCC patients and Group B included 30 healthy controls. A standardized procedure was followed to collect saliva samples. FTIR spectroscopy was done for all the saliva samples collected from both Group A and B. An IR Prestige-21 (Shimadzu Corp, Japan) spectrometer was used to record IR spectra in the 40-4000 cm -1 range SVM classifier was applied in the classification of disease state from normal subjects using FTIR data. The peaks were identified at wave no 1180 cm -1 , 1230 cm -1 , 1340 cm -1 , 1360 cm -1 , 1420 cm -1 , 1460 cm -1 , 1500 cm -1 , 1540 cm -1 , 1560 cm -1 , and 1637 cm -1 . The observed results of SVM demonstrated the accuracy of 91.66% in the classification of Cancer tissues from the normal subjects with sensitivity of 83.33% while specificity and precision of 100.0%. The development of oral cancer leads to noticeable alterations in the secondary structure of proteins. These findings emphasize the promising use of ATR-FTIR platforms in conjunction with machine learning as a reliable, non-invasive, reagent-free, and highly sensitive method for screening and monitoring individuals with oral cancer.
Keyphrases
- machine learning
- public health
- end stage renal disease
- ejection fraction
- newly diagnosed
- high resolution
- chronic kidney disease
- deep learning
- gene expression
- peritoneal dialysis
- big data
- cardiovascular disease
- young adults
- papillary thyroid
- electronic health record
- risk factors
- squamous cell carcinoma
- artificial intelligence
- patient reported outcomes
- type diabetes
- dna damage
- coronary artery disease
- oxidative stress
- single molecule
- structural basis