Genome sequence of Hemileia vastatrix Berk. and Br. (Race I), the causal agent of coffee leaf rust, isolate from Risaralda, Colombia.

Carlos A Ángel C Gustavo A Marín-Ramírez Carlos E Maldonado L

Published in: Microbiology resource announcements (2023)

Coffee leaf rust, caused by the fungus Hemileia vastatrix (Basidiomycota; Pucciniomycota) , is a devastating disease spread worldwide. To improve the available genomes, we use PacBio HiFi sequencing enhanced by Dovetail Omni-C chromatin conformation capture to assemble a highly contiguous 747.98 Mb genome of an isolate collected from Coffea arabica .

Keyphrases

genome wide
gene expression
dna damage
transcription factor
molecular dynamics simulations
oxidative stress