1-Deoxy-d-xylulose 5-phosphate reductoisomerase as target for anti Toxoplasma gondii agents: crystal structure, biochemical characterization and biological evaluation of inhibitors.
Flaminia MazzoneAstrid HoeppnerJens ReinersChristoph G W GertzenVioletta ApplegateMona A AbdullazizJulia GottsteinDaniel DegrandiMartina WesemannThomas KurzSander H J SmitsKlaus PfefferPublished in: The Biochemical journal (2024)
Toxoplasma gondii is a widely distributed apicomplexan parasite causing toxoplasmosis, a critical health issue for immunocompromised individuals and for congenitally infected foetuses. Current treatment options are limited in number and associated with severe side effects. Thus, novel anti-toxoplasma agents need to be identified and developed. 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) is considered the rate-limiting enzyme in the non-mevalonate pathway for the biosynthesis of the isoprenoid precursors isopentenyl pyrophosphate and dimethylallyl pyrophosphate in the parasite, and has been previously investigated for its key role as a novel drug target in some species, encompassing Plasmodia, Mycobacteria and Escherichia coli. In this study, we present the first crystal structure of T. gondii DXR (TgDXR) in a tertiary complex with the inhibitor fosmidomycin and the cofactor NADPH in dimeric conformation at 2.5 Å resolution revealing the inhibitor binding mode. In addition, we biologically characterize reverse α-phenyl-β-thia and β-oxa fosmidomycin analogues and show that some derivatives are strong inhibitors of TgDXR which also, in contrast with fosmidomycin, inhibit the growth of T. gondii in vitro. Here, ((3,4-dichlorophenyl)((2-(hydroxy(methyl)amino)-2-oxoethyl)thio)methyl)phosphonic acid was identified as the most potent anti T. gondii compound. These findings will enable the future design and development of more potent anti-toxoplasma DXR inhibitors.
Keyphrases
- toxoplasma gondii
- crystal structure
- escherichia coli
- public health
- healthcare
- magnetic resonance
- early onset
- klebsiella pneumoniae
- mental health
- emergency department
- magnetic resonance imaging
- drug resistant
- staphylococcus aureus
- molecular dynamics simulations
- intensive care unit
- acinetobacter baumannii
- multidrug resistant
- transcription factor
- structure activity relationship
- single molecule
- acute respiratory distress syndrome
- cystic fibrosis
- binding protein
- extracorporeal membrane oxygenation
- reactive oxygen species
- pseudomonas aeruginosa
- dna binding
- neural network
- candida albicans
- respiratory failure