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SalMotifDB: a tool for analyzing putative transcription factor binding sites in salmonid genomes.

Teshome Dagne MulugetaTorfinn NomeThu-Hien ToManu Kumar GundappaDaniel J MacqueenDag Inge VågeSimen Rød SandveTorgeir R Hvidsten
Published in: BMC genomics (2019)
SalMotifDB is an effective tool for analyzing transcription factors, their binding sites and the resulting gene regulatory networks in salmonid species, and will be an important tool for gaining a better mechanistic understanding of gene regulation and the associated phenotypes in salmonids. SalMotifDB is available at https://salmobase.org/apps/SalMotifDB .
Keyphrases
  • transcription factor
  • dna binding
  • network analysis