Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain.
Mingyue WangYang LiuTinggang WenWeiwei LiuQionghua GaoJie ZhaoZi-Jun XiongZhifeng WangWei JiangYeya YuLiang WuYue YuanXiaoyu WeiJiangshan XuMengnan ChengPei ZhangPanyi LiYong HouHuanming YangGuojie ZhangQiye LiChuanyu LiuLongqi LiuPublished in: Scientific data (2020)
The emergence of social organization (eusociality) is a major event in insect evolution. Although previous studies have investigated the mechanisms underlying caste differentiation and social behavior of eusocial insects including ants and honeybees, the molecular circuits governing sociality in these insects remain obscure. In this study, we profiled the transcriptome and chromatin accessibility of brain tissues in three Monomorium pharaonis ant castes: queens (including mature and un-mated queens), males and workers. We provide a comprehensive dataset including 16 RNA-sequencing and 16 assay for transposase accessible chromatin (ATAC)-sequencing profiles. We also demonstrate strong reproducibility of the datasets and have identified specific genes and open chromatin regions in the genome that may be associated with the social function of these castes. Our data will be a valuable resource for further studies of insect behaviour, particularly the role of brain in the control of eusociality.
Keyphrases
- genome wide
- gene expression
- single cell
- dna damage
- dna methylation
- resting state
- rna seq
- transcription factor
- white matter
- healthcare
- mental health
- functional connectivity
- high throughput
- case control
- electronic health record
- minimally invasive
- oxidative stress
- big data
- atomic force microscopy
- high resolution
- subarachnoid hemorrhage