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MicroPredict: predicting species-level taxonomic abundance of whole-shotgun metagenomic data using only 16S amplicon sequencing data.

Chloe Soohyun JangHakin KimDonghyun KimBuhm Han
Published in: Genes & genomics (2024)
We expect that our approach will help researchers accurately approximate the species-level abundances of microbiome profiles in datasets for which only cost-effective 16S sequencing has been applied.
Keyphrases
  • electronic health record
  • single cell
  • big data
  • antibiotic resistance genes
  • rna seq
  • genetic diversity
  • data analysis
  • microbial community
  • deep learning