Vertical Hydrologic Exchange Flows Control Methane Emissions from Riverbed Sediments.

CH 4 emissions from inland waters are highly uncertain in the current global CH 4 budget, especially for streams, rivers, and other lotic systems. Previous studies have attributed the strong spatiotemporal heterogeneity of riverine CH 4 to environmental factors such as sediment type, water level, temperature, or particulate organic carbon abundance through correlation analysis. However, a mechanistic understanding of the basis for such heterogeneity is lacking. Here, we combine sediment CH 4 data from the Hanford reach of the Columbia River with a biogeochemical-transport model to show that vertical hydrologic exchange flows (VHEFs), driven by the difference between river stage and groundwater level, determine CH 4 flux at the sediment-water interface. CH 4 fluxes show a nonlinear relationship with the magnitude of VHEFs, where high VHEFs introduce O 2 into riverbed sediments, which inhibit CH 4 production and induce CH 4 oxidation, and low VHEFs cause transient reduction in CH 4 flux (relative to production) due to reduced advective CH 4 transport. In addition, VHEFs lead to the hysteresis of temperature rise and CH 4 emissions because high river discharge caused by snowmelt in spring leads to strong downwelling flow that offsets increasing CH 4 production with temperature rise. Our findings reveal how the interplay between in-stream hydrologic flux besides fluvial-wetland connectivity and microbial metabolic pathways that compete with methanogenic pathways can produce complex patterns in CH 4 production and emission in riverbed alluvial sediments.