The genome of the Black Bengal goat (Capra hircus).

Md Habib Ullah MasumAbdul BatenMasum BillahMohammad Atique Ul AlamKazi Shefaul Mulk ShawrobSourav SahaMuntaha ChowdhuryAtif Hasan RahmanMichael StearGous MiahMahadia KumkumMohammad Sirazul IslamMohammad Alamgir HossainA K M Moniruzzaman MollahMd Kabirul Islam Khan

Published in: BMC research notes (2019)

The genomic DNA of a local (Chattogram, Bangladesh) healthy male Black Bengal goat (Capra hircus) was extracted and then sequenced. Sequencing was completed using the Illumina HiSeq 2500 sequencing platform and the draft assembly was generated using the "ARS1" genome as the reference. MAKER gene annotation pipeline was utilized to annotate 26,458 gene models. Genome completeness was assessed using BUSCO (Benchmarking Universal Single-Copy Orthologs) which showed 82.5% completeness of the assembled genome.

Keyphrases

genome wide
copy number
single cell
dna methylation
gene expression
genome wide identification
high throughput
high throughput sequencing