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Dodecamers derived from the crystal structure were found in the pre-crystallization solution of the transaminase from the thermophilic bacterium Thermobaculum terrenum by small-angle X-ray scattering.

Margarita A MarchenkovaPetr V KonarevTatiana V RakitinaVladimir I TimofeevAnastasiia S BoikovaYulia A DyakovaKseniia B IlinaDmitry A KorzhenevskiyAlena Yu NikolaevaYurii V PisarevskyMikhail V Kovalchuk
Published in: Journal of biomolecular structure & dynamics (2019)
The pre-crystallization solution of the transaminase from Thermobaculum terrenum (TaTT) has been studied by small-angle X-ray scattering (SAXS). Regular changes in the oligomeric composition of the protein were observed after the addition of the precipitant. Comparison of the observed oligomers with the crystal structure of TaTT (PDB ID 6GKR) shows that dodecamers may act as building blocks in the growth of transaminase single crystals. Correlating of these results to the similar X-ray studies of other proteins suggests that SAXS may be a valuable tool for searching optimum crystallization conditions. AbbreviationSAXSsmall-angle X-ray scatteringTatransaminaseTaTTtransaminase from Thermobaculum terrenumPLPpyridoxal-5'-phosphateR-PEAR-(þ)-1-phenylethylamineBCATbranched-chain amino acid aminotransferaseDAATD-aminoacid aminotransferaseR-TAR-amine:pyruvate transaminaseCommunicated by Ramaswamy H. Sarma.
Keyphrases
  • high resolution
  • dual energy
  • crystal structure
  • amino acid
  • electron microscopy
  • computed tomography
  • magnetic resonance
  • anaerobic digestion
  • ionic liquid