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Noncooperative guest binding by metal-free [2 + 2] Schiff-base macrocycles.

Mohammad T ChaudhryBrian O PatrickShigehisa AkineMark J MacLachlan
Published in: Organic & biomolecular chemistry (2022)
Salphen-based [<i>n</i> + <i>n</i>] macrocycles have been widely explored for their unique chemical and topological properties following metal ion coordination. Despite having vastly different reactivity than their coordinated counterparts, fewer studies have focused on metal-free salphen macrocycles. We investigated the binding of [2 + 2] Schiff-base macrocycle host 3, which contains a central 18-crown-6-like cavity and two N<sub>2</sub>O<sub>2</sub> moieties. This macrocycle strongly binds to spherical cationic guests (<i>K</i><sub>11</sub> ≈ 10<sup>3</sup>-10<sup>4</sup> M<sup>-1</sup>, DCM/MeCN). The most robust binding was shown for K<sup>+</sup> and Na<sup>+</sup>, followed by Li<sup>+</sup> and Rb<sup>+</sup>. More sterically demanding cationic guests like dibenzylammonium (<b>DBA</b><sup>+</sup>) showed almost no binding. The binding pocket in 3 is slightly smaller than 18-crown-6, resulting in binding outside the cavity, which provides a scaffold appropriate for 2 : 1 complexes, where two host molecules sandwich the guest. All host-guest complexes follow a 2 : 1 <i>noncooperative</i> binding model, where each successive binding event is less likely than the previous, unlike coordinated versions of 3, where most binding is 1 : 1.
Keyphrases
  • dna binding
  • binding protein
  • transcription factor
  • single molecule
  • atomic force microscopy
  • solid state
  • water soluble