Nucleic Acid Amplification Circuit-Based Hydrogel (NACH) Assay for One-Step Detection of Metastatic Gastric Cancer-Derived Exosomal miRNA.
Seung Beom SeoJaewoo LimKyujung KimInhee MaengHyun Wook RhoHye Young SonEunjung KimEunji JangTaejoon KangJuyeon JungSeung Jae OhYong-Min HuhEun-Kyung LimPublished in: Advanced science (Weinheim, Baden-Wurttemberg, Germany) (2024)
Gastric cancer (GC) is recognized as the fifth most prevalent malignant tumor worldwide. It is characterized by diverse clinical symptoms, treatment responses, and prognoses. In GC prognosis, the promotion of epithelial-mesenchymal transition (EMT) fosters cancer cell invasion and metastasis, thereby triggering the dissemination of tumor cells. This study proposes a nucleic acid amplification circuit-based hydrogel (NACH) assay for identifying exosomal miRNA derived from metastatic GC. The NACH assay employs the rolling circle amplification method and targets miRNA-21, a tumor-related oncogene, and miRNA-99a, which promotes EMT. Specific amplification probes for each target are immobilized within the hydrogel, enabling a streamlined, one-step amplification reaction. The NACH assay exhibits a detection limit of 1 fm for miRNA-21 and miRNA-99a, thereby enabling rapid and highly sensitive on-site detection. Performance evaluation using exosomal miRNA extracted from cell culture media, mouse plasma, and human plasma revealed fluorescence intensity patterns similar to those obtained in qRT-PCR. Furthermore, deploying a custom-developed portable fluorometer for the NACH assay allows for diagnostic performance assessment and point-of-care testing using clinical samples from GC patients. These findings emphasize the potential of the NACH assay to be used as a robust tool for the genetic diagnosis of GC based on exosome detection.
Keyphrases
- nucleic acid
- epithelial mesenchymal transition
- high throughput
- loop mediated isothermal amplification
- label free
- real time pcr
- drug delivery
- gas chromatography
- end stage renal disease
- newly diagnosed
- small molecule
- gene expression
- signaling pathway
- prognostic factors
- chronic kidney disease
- high intensity
- peritoneal dialysis
- climate change
- single cell
- replacement therapy
- dna methylation
- living cells
- fluorescent probe
- patient reported
- transforming growth factor
- copy number
- tissue engineering
- sensitive detection
- single molecule