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Computational Analysis of the Superoxide Dismutase Mimicry Exhibited by a Zinc(II) Complex with a Redox-Active Organic Ligand.

Evangelos MiliordosJamonica L MooreSegun V ObisesanJulian OppeltIvana Ivanović-BurmazovićChristian R Goldsmith
Published in: The journal of physical chemistry. A (2024)
Previously, we found that a Zn(II) complex with the redox-active ligand N -(2,5-dihydroxybenzyl)- N , N ', N '-tris(2-pyridinylmethyl)-1,2-ethanediamine (H 2 qp1) was able to act as a functional mimic of superoxide dismutase, despite its lack of a redox-active transition metal. As the complex catalyzes the dismutation of superoxide to form O 2 and H 2 O 2 , the quinol in the ligand is believed to cycle between three oxidation states: quinol, quinoxyl radical, and para -quinone. Although the metal is not the redox partner, it nonetheless is essential to the reactivity since the free ligand by itself is inactive as a catalyst. In the present work, we primarily use calculations to probe the mechanism. The calculations support the inner-sphere decomposition of superoxide, suggest that the quinol/quinoxyl radical couple accounts for most of the catalysis, and elucidate the many roles that proton transfer between the zinc complexes and buffer has in the reactivity. Acid/base reactions involving the nonmetal-coordinating hydroxyl group on the quinol are predicted to be key to lowering the energy of the intermediates. We prepared a Zn(II) complex with N -(2-hydroxybenzyl)- N , N ', N '-tris(2-pyridinylmethyl)-1,2-ethanediamine (Hpp1) that lacks this functional group and found that it could not catalyze the dismutation of superoxide; this confirms the importance of the second, distal hydroxyl group of the quinol.
Keyphrases
  • hydrogen peroxide
  • electron transfer
  • transition metal
  • density functional theory
  • molecular dynamics simulations
  • nitric oxide
  • ionic liquid
  • hepatitis c virus
  • monte carlo
  • living cells