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The complete mitochondrial genome of water flea Ceriodaphnia dubia (Crustacea: Cladocera) NIES strain.

Kyoshiro HikiKenta OkaNobuyoshi NakajimaHaruna WatanabeHiroshi YamamotoTakahiro Yamagishi
Published in: Mitochondrial DNA. Part B, Resources (2023)
Water flea Ceriodaphnia dubia has been widely used for risk assessments of chemicals and environmental contamination. In this study, the complete mitochondrial genome (mitogenome) of this species NIES strain was determined using short-read high throughput and long-read sequencing technologies. The mitogenome of C. dubia was 15,170 bp in length and consisted of 13 protein-coding genes (PCGs), 2 ribosomal RNAs (rRNAs), and 22 transfer RNAs (tRNAs). The gene order was identical to the pattern conserved across crustaceans. The complete mitogenome of the NIES strain will serve as genetical reference in ecological risk assessments in Japan, as well as resources for future phylogenetical studies using cladocerans.
Keyphrases
  • genome wide
  • high throughput
  • oxidative stress
  • human health
  • single cell
  • single molecule
  • risk assessment
  • transcription factor
  • current status
  • gene expression
  • binding protein
  • genome wide analysis
  • case control