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Co-AMPpred for in silico-aided predictions of antimicrobial peptides by integrating composition-based features.

Onkar SinghWen-Lian HsuEmily Chia-Yu Su
Published in: BMC bioinformatics (2021)
Experimental results show that combining composition-based and physicochemical features outperformed existing methods on both the benchmark training dataset and a reduced training dataset. Finally, our proposed method achieved 80.8% accuracies and 0.871 area under the receiver operating characteristic curve by evaluating on independent test set. Our code and datasets are available at https://github.com/onkarS23/CoAMPpred .
Keyphrases
  • virtual reality
  • molecular docking
  • rna seq