Automated Fovea Detection in Spectral Domain Optical Coherence Tomography Scans of Exudative Macular Disease.
Jing WuSebastian M WaldsteinAlessio MontuoroBianca S GerendasGeorg LangsUrsula Margarethe Schmidt-ErfurthPublished in: International journal of biomedical imaging (2016)
In macular spectral domain optical coherence tomography (SD-OCT) volumes, detection of the foveal center is required for accurate and reproducible follow-up studies, structure function correlation, and measurement grid positioning. However, disease can cause severe obscuring or deformation of the fovea, thus presenting a major challenge in automated detection. We propose a fully automated fovea detection algorithm to extract the fovea position in SD-OCT volumes of eyes with exudative maculopathy. The fovea is classified into 3 main appearances to both specify the detection algorithm used and reduce computational complexity. Based on foveal type classification, the fovea position is computed based on retinal nerve fiber layer thickness. Mean absolute distance between system and clinical expert annotated fovea positions from a dataset comprised of 240 SD-OCT volumes was 162.3 µm in cystoid macular edema and 262 µm in nAMD. The presented method has cross-vendor functionality, while demonstrating accurate and reliable performance close to typical expert interobserver agreement. The automatically detected fovea positions may be used as landmarks for intra- and cross-patient registration and to create a joint reference frame for extraction of spatiotemporal features in "big data." Furthermore, reliable analyses of retinal thickness, as well as retinal structure function correlation, may be facilitated.
Keyphrases
- optical coherence tomography
- diabetic retinopathy
- machine learning
- deep learning
- big data
- optic nerve
- loop mediated isothermal amplification
- label free
- artificial intelligence
- high throughput
- computed tomography
- clinical practice
- oxidative stress
- magnetic resonance imaging
- high resolution
- case report
- mass spectrometry
- anti inflammatory