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ShAn: An easy-to-use tool for interactive and integrated variant annotation.

Venkat Subramaniam RathinakannanHannu-Pekka SchukovSamuel HeronJohanna SchleutkerCsilla Sipeky
Published in: PloS one (2020)
We have developed an interactive application, which harnesses the easy usability of R Shiny and combines it with the versatile annotation features of ANNOVAR. This application is easy to use and gives comprehensive annotations for user supplied vcf files using multiples databases. The output table contains the list of variants and their corresponding annotation presented within the graphical interface. In addition, the annotation results are downloadable as text file.
Keyphrases
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