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Using whole-genome SNP data to reconstruct a large multi-generation pedigree in apple germplasm.

Hélène MurantyCaroline DenancéLaurence FeugeyJean-Luc CrépinYves BarbierStefano TartariniMatthew OrdidgeMichela TroggioMarc LateurHilde NybomFrantisek PaprsteinFrançois LaurensCharles-Eric Durel
Published in: BMC plant biology (2020)
The availability of over 1400 apple genotypes, previously filtered for genetic uniqueness and providing a broad representation of European germplasm, has been instrumental for the success of this large pedigree reconstruction. It enlightens the history of empirical selection and recent breeding of apple cultivars in Europe and provides insights to speed-up future breeding and selection.
Keyphrases
  • genome wide
  • electronic health record
  • current status
  • gene expression
  • magnetic resonance imaging
  • magnetic resonance
  • high density
  • image quality
  • deep learning